Publications †

2013 †

ORIGINAL PAPERS †

by year 2012，2011

Tomita, H., T. Imanaka, H. Atomi.
Identification and characterization of an archaeal ketopantoate reductase and its involvement in regulation of coenzyme A biosynthesis.
Mol. Microbiol. 90(2):307-321, 2013.

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Sato, T., M. Fujihashi, Y. Miyamoto, K. Kuwata, E. Kusaka, H. Fujita, K. Miki and H. Atomi.
An uncharacterized member of the ribokinase family in Thermococcus kodakarensis exhibits myo-inositol kinase activity.
J. Biol. Chem. 288(29):20856-20867, 2013.

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Yokooji, Y., T. Sato, S. Fujiwara, T. Imanaka, and H. Atomi.
A genetic examination of initial amino acid oxidation and glutamate catabolism in the hyperthermophilic archaeon Thermococcus kodakarensis.
J. Bacteriol. 195(9):1940-1948, 2013.

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Tominaga, T., S. Watanabe, R. Matsumi, H. Atomi, T. Imanaka, and K. Miki.
Crystal structures of the carbamoylated and cyanated forms of HypE for [NiFe] hydrogenase maturation.
Proc. Natl. Acad. Sci. USA 110(51):20485-20490, 2013.

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Elmore, J.R., Y. Yokooji, T. Sato, S. Olson, C.V.C. Glover, III, B.R. Graveley, H. Atomi, R.M. Terns and M.P. Terns.
Programmable plasmid interference by the CRISPR-Cas system in Thermococcus kodakarensis.
RNA Biol. 10(5): 828-840, 2013.

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Nishitani, Y., R. Aono, A. Nakamura, T. Sato, H. Atomi, T. Imanaka, and K. Miki.
Structure analysis of archaeal AMP phosphorylase reveals two unique modes of dimerization.
J. Mol. Biol. 425(15): 2709-2721, 2013.

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Sasaki, D., S. Watanabe, R. Matsumi, T. Shoji, A. Yasukochi, K. Tagashira, W. Fukuda, T. Kanai, H. Atomi, T. Imanaka and K. Miki.
Identification and structure of a novel archaeal HypB for [NiFe] hydrogenase maturation.
J. Mol. Biol. 425(10):1627-1640, 2013.

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Fukuda, W., T. Kimura, S. Araki, Y. Miyoshi, H. Atomi, T. Imanaka.
Lysobacter oligotrophicus sp. nov., a bacterium isolated from a freshwater lake in Skarvsnes, Antarctica.
Int. J. Syst. Evol. Microbiol. doi: 10.1099/ijs.0.051805-0, 2013.

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Maruyama, H., J.C. Harwood, K.M. Moore, K. Paszkiewicz, S.C. Durley, H. Fukushima, H. Atomi, K. Takeyasu, N. A. Kent.
An alternative beads-on-a-string chromatin architecture in Thermococcus kodakarensis.
EMBO Rep. 14(8):711-717, 2013.

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Tagashira, K., W. Fukuda, M. Matsubara, T. Kanai, H. Atomi, T. Imanaka.
Genetic studies on the virus-like regions in the genome of hyperthermophilic archaeon, Thermococcus kodakarensis.
Extremophiles, 17:153-160, 2013.

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OTHER PUBLICATIONS †

by year 2012，2011

Atomi, H., H. Tomita, T. Ishibashi, Y. Yokooji, T. Imanaka.
CoA biosynthesis in archaea.
Biochem. Soc. Trans., 41:427-431, 2013.

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Sato, T. and H. Atomi.
Genomics of thermophilic bacteria and archaea.
In Thermophilic Microbes in Environmental and Industrial Biotechnology
Ed. T. Satyanarayana, J. Littlechild, Y. Kawarabayasi
Chapter 11, 307-330, Springer, 2013.